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Le club de rugby du moulin à vent est une association sportive affiliée à la Fédération Française de Rugby à XV consacrée à la découverte, l’apprentissage, la pratique et l’étude du Rugby à XV, au cœur du quartier du Moulin à Vent à Perpignan.
- Actualités
Rentrée sportive 2023-2024 Reprise Rugby à Perpignan. Lire...
- Le Club
Retrouvez ici toutes les informations sur le club et son...
- Rejoins-nous
Rugby Moulin à Vent Perpignan - Stade Roger Ramis - Rue du...
- Les équipes
Toutes les informations sur nos équipes, les personnes à...
- Partenaires
Le but de ce partenariat est de mettre en valeur votre...
- Photos
U10 - RMVP entraînement Arlettaz/Freshwater - 15 mars 2017....
- Contact
Le RMVP est présent sur les réseaux sociaux, venez nous...
- Informations Club
Rugby Moulin à Vent Perpignan - Stade Roger Ramis - Rue du...
- Actualités
- A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool for Genome-Wide Association Study
- Installation
- Phenotype
- PLINK binary
- VCF
- Hapmap
- Numeric
- Kinship
- Principal Components
- Basic
- GeneratedCaptionsTabForHeroSec
#-----------------------rMVP v1.0.0 is coming, and better again!------------------------# Repos:
Github: https://github.com/xiaolei-lab/rMVP Gitee(quick access in China): https://gitee.com/xiaolei-lab/rMVP
Authors:
Design and Maintenance: Lilin Yin#, Haohao Zhang#, Shuhong Zhao, Xinyun Li, and Xiaolei Liu. Contributors: Zhenshuang Tang, Jingya Xu, Dong Yin, Zhiwu Zhang, Xiaohui Yuan, Mengjin Zhu Citation: Yin L, Zhang H, Tang Z, Xu J, Yin D, Zhang Z, Yuan X, Zhu M, Zhao S, Li X. rMVP: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated tool for Genome-Wide Association Study, Genomics, Proteomics & Bioinformatics , 2021, 19 (4), 619-628, doi: 10.1016/j.gpb.2020.10.007. Questions, suggestions, and bug reports are welcome and appreciated: xiaoleiliu@mail.hzau.edu.cn
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WE STRONGLY RECOMMEND TO INSTALL MVP ON Microsoft R Open(https://mran.microsoft.com/download/) (deprecated)
•The stable version:
•The latest version:
After installed successfully, MVP can be loaded by typing
Typing ?MVP could get the details of all parameters.
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We suggest to provide the phenotype file, users needn't to manually pre-treat the order of phenotype and genotype individuals, rMVP could automatically adjust the order of genotype file to be consistent with phenotype file. Note that if the phenotype is provided in data conversion, rMVP will generate a new phenotype file, please remember to load it for analysis rather than original one.
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If you have genotype data in PLINK Binary format (details see http://zzz.bwh.harvard.edu/plink/data.shtml#bed):
fileBed, name of genotype data in PLINK Binary format
fileKin, TRUE or FALSE, if TRUE, kinship matrix represents relationship among individuals will be calculated
filePC, TRUE or FALSE, if TRUE, principal component analysis will be performed
out, prefix of output file
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If you have genotype data in VCF format:
fileVCF, name of genotype data in VCF format
filePhe, name of phenotype data
sep.phe, separator of phenotype file
fileKin, TRUE or FALSE, if TRUE, kinship matrix represents relationship among individuals will be calculated
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If you have genotype data in Hapmap format:
fileHMP, a string or a string vector, e.g. fileHMP = "hapmap.txt" or fileHMP = c("chr1.hmp.txt", "chr2.hmp.txt", "chr3.hmp.txt")
filePhe, name of phenotype file
sep.phe, separator of phenotype file
fileKin, TRUE or FALSE, if TRUE, kinship matrix represents relationship among individuals will be calculated
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If you have genotype data in Numeric (m * n, m rows and n columns, m is the number of SNPs, n is the number of individuals) format:
fileNum, name of genotype data in Numeric format
filePhe, name of phenotype file
fileMap, name of map file, a header should be added, e.g. SNP Chr Pos
sep.num, separator of Numeric file
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If you have Kinship matrix data that represents the relationship among individuals
fileKin, name of Kinship matrix data, the dimension is n * n (n is sample size), no taxa names included
sep.kin, separator of Kinship file
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If you have Principal Components data
filePC, name of Principal Components matrix data, the dimension is n * nPC (n is sample size, nPC is number of first columns of PCs), no taxa names and header row included
sep.pc, separator of Principal Components file
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At least you should prepare three datasets: genotype, phenotype, and map
genotype, genotype data generated by 'MVP.Data' function
phenotype, phenotype data, the first column is taxa name and second column is phenotype value. Note that if the phenotype is provided in data conversion, rMVP will generate a new phenotype file, please remember to load it for analysis rather than original one
rMVP is an R package that performs genome-wide association study (GWAS) with memory efficiency, visualization and parallel computing. It supports various data formats, methods and plots for GWAS analysis.
Le RMVP est une structure de loisir consacrée à la découverte, l'apprentissage, la pratique et l'étude du jeu de RUGBY à XV au cœur du quartier du Moulin- à-Vent à Perpignan (mitoyen de l'église Saint-Paul), accueillant vos filles et garçons, dès l'âge de 6 ans dans un cadre sécurisé et sécurisant : le Stade Roger Ramis.
RMVP, Perpignan, France. 408 likes · 28 talking about this. Le RMVP est une association accueillant filles et garçons dès l’âge de 6 ans dans un cadre sécurisé.
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Rentrée sportive 2023-2024 Reprise Rugby à Perpignan. Lire la suite... Informations Club · 27. août 2024
Informations et contacts du club de Rugby RUGBY MOULIN A VENT PERPIGNAN.
RUGBY MOULIN A VENT PERPIGNAN : fiche contact du club de rugby, pratiques proposées… trouver un club près de chez vous avec la Fédération Française de Rugby.