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Plant Pan Genomes. Gramene-powered sites focused on specific crops.
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Cite - Gramene
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Comparative plant genomics for crops and model organisms....
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Funding - Gramene
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Gramene continues to display Expression Atlas data with a...
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Comparative plant genomics
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Gramene is a resource for plant comparative genomics based on Ensembl technology, developed by the Cold Spring Harbor Laboratory and the European Bioinformatics Institute. It provides a common set of databases with Ensembl Plants, and collaborates on the integration of content, quality control and new features.
Gramene continues to display Expression Atlas data with a total of 1007 plant experiments. Baseline gene expression data for 23 plant genomes has been curated and processed with the EMBL-EBI's Expression Atlas , and is available via Gramene's Search, Gramene's Genome Browser, and Gramene's pathways interface, the Plant Reactome.
16 janv. 2022 · Gramene is a bioinformatics resource for accessing, visualizing, and comparing plant genomes and biological pathways. It hosts annotations for over 90 plant genomes, including agronomically important crops, fruits, vegetables, and models, and provides tools for gene homology, synteny, variation, and pathway analysis.
10 nov. 2020 · Gramene (http://www.gramene.org), a knowledgebase founded on comparative functional analyses of genomic and pathway data for model plants and major crops, supports agricultural researchers worldwide. The resource is committed to open access and reproducible science based on the FAIR data principles. Since the last NAR update, we made ...
- Marcela K Tello-Ruiz, Sushma Naithani, Parul Gupta, Andrew Olson, Sharon Wei, Justin Preece, Yinping...
- 2021
Gramene is an online database for plant genomes and biological pathways, covering over 30 species with gene annotations, phylogenetics, variation data, and pathway databases. Learn how to access, visualize, and compare plant genomes and pathways using Gramene's tools and platforms.
4 nov. 2007 · Gramene is a database for genetic, genomic and comparative data for major crop species and other plants. It provides genome annotations, pathways, genetic diversity, orthologs, phylogenies and more.
