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Code Ocean is a reproducible and traceable computational science platform for collaborative research in the cloud. Set up environments, provision compute, develop analysis with others, and scale bioinformatic pipelines. Book a Demo Product overview. Trusted by thousands of computational scientists in Biotech and Pharma:
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Quick answers to particular technical questions. Code Ocean's philosophy on, and implementation details of, reproducibility and preservation matters. Answers to specific questions that users have asked. These template capsules demonstrate Code Ocean features, and you can duplicate them and upload your own materials to begin a project.
Tutorials. In-depth walkthroughs for using Code Ocean. 4 articles. Tutorial: publishing a library/package on Code Ocean. Tutorial: debugging and remedying installation issues for R packages on Code Ocean. Tutorial: writing a custom Dockerfile to build a capsule from a manifest file. Tutorial: how to write a postInstall script that downloads and ...
Using the postInstall script for further customization. Monitoring and inspecting the result of the environment setup phase. Setting up new or additional languages on Code Ocean via the package managers. Covering: 1) what is a compute capsule 2) uploading code and data 3) configuring your environment, 4) publishing on Code Ocean.
Code Ocean allows authors to increase the visibility and impact of their work by uploading the code associated with an article. Code can be uploaded at any time—during review, acceptance or after publication. Authors can take advantage of this service so that readers can view and execute code with ease. Authors will also: Once the code is ...
